Skip to content
Back to search
30
MCP

ENCODE Toolkit

pulsemcp/encode toolkit

Search ENCODE genomics data and cross-reference biomedical databases.

Uptime
0.0%
6 probes
Response
0ms
last probe
Tools
0
callable
Primary URL

Similar MCP servers embedding-nearest

ENCODE Toolkit
20 MCP tools + 48 skills for ENCODE Project genomics — search, download, pipelines
0 tools
Encoder AI
Tools for encoding, decoding, and transforming data in various formats.
0 tools
Bio-Data Parser
Bioinformatics and genomic sequence parser for clinical research.
0 tools · sse
Ensembl
Integrates with Ensembl's genomic database through 20+ specialized tools for gene lookup, sequence retrieval, comparative genomics, variant
0 tools
NCBI Gene Summary
Fetch gene summary metadata (symbol, description, chromosome, map location, aliases, genomic coordinates) for an NCBI Entrez Gene ID via E-u
0 tools · http
Ncbi Eutils
NCBI E-utilities — federated Entrez search/fetch (PubMed/Gene/Nucleotide/…)
0 tools · streamable-http

How to use

Add to your Claude Desktop / Cursor / Cline MCP config:

{
  "mcpServers": {
    "encode_toolkit": {
      "url": "None",
      "transport": "http"
    }
  }
}